Latest posts

  • Hyper-stable Designed Peptides and the Coming of Age for De Novo Protein Design

    Hyper-stable Designed Peptides and the Coming of Age for De Novo Protein Design

    Small constrained peptides combine the stability of small molecule drugs with the selectivity and potency of antibody-based therapeutics. However, peptide-based therapeutics have largely remained underexplored due to the limited diversity of naturally occurring peptide scaffolds, and a lack of methods to design them rationally.  New computational design and wet lab methods…

  • 2016 IPD Newsletter from David Baker

    2016 IPD Newsletter from David Baker

    It was a great year for the Institute for Protein Design and we couldn’t have done all of our amazing work without the support from our donors and contributors! Thank you to everyone who helped us, whether through a donation, collaboration, playing Foldit, or otherwise. We’ve filled the IPD Newsletter…

  • Designed Protein Containers Push Bioengineering Boundaries

    Designed Protein Containers Push Bioengineering Boundaries

    Earlier this month, Baker lab researchers reported the computational design of a hyperstable 60-subunit protein icosahedron in Nature (Hsia et al); icosahedral protein structures are commonly observed in natural biological systems for packaging and transport (e.g. viral capsids). The described design was composed of 60 trimeric protein building blocks that…

  • Icosahedral protein nanocage – new paper and podcast

    Icosahedral protein nanocage – new paper and podcast

    The Baker lab, in collaboration with Neil King, Trisha Davis and Tamir Gonen’s labs, recently had a paper published in Nature about a stable icosahedral nanocage whose applications could span anywhere from drug delivery to vaccine design! The title is “Design of a hyperstable 60-subunit protein icosahedron” and it was…

  • De novo design makes a splash

    De novo design makes a splash

    A paper recently published in Science by several members of the IPD, in collaboration with others, entitled “De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity,” discusses designing proteins in a similar way to DNA so that they may be used to engineer structures. Geekwire has written up a…

  • Foldit Turns 8!

    Over the weekend, Foldit had its 8th birthday! In celebration, they will be tweeting (@Foldit) fun facts and infographics on their feed. Haven’t heard of the game or tried playing it yet? What better time than now! Click here to learn more and to join an ever-growing community that spans…

  • IPD at Xconomy’s EXOME’s Seattle’s Life Science Disruptors 2016

    IPD at Xconomy’s EXOME’s Seattle’s Life Science Disruptors 2016

    On Monday, representatives from the IPD spoke on a panel at Xconomy’s EXOME’s Seattle’s Life Science Disruptors 2016 event. It was titled “Proteins Like You’ve Never Seen” and included Lucas Nivon (Cyrus), Ingrid Swanson Putlz (PvP Biologics), Aaron Chevalier (Virvio), and David Baker. The event’s description was as follows: Seattle…

  • David Baker wins a Leaders in Health Care Award, listed among ‘world’s most influential scientific minds’

    David Baker wins a Leaders in Health Care Award, listed among ‘world’s most influential scientific minds’

    We are proud to announce that last week, David was named winner of Seattle Business‘ 2016 Leaders in Health Care Awards for “Outstanding Achievement in Delivery of Digital Health.” The award was one of several given out, with categories ranging from “Lifetime Achievement” to “Outstanding Achievement: Health Care Delivery.” Although…

  • Franziska Seeger @ Ignite Seattle

    Franziska Seeger @ Ignite Seattle

    On February 18th, WRF Fellow Franziska Seeger gave a talk about proteins at Ignite Seattle. Presenters have 5 minutes to speak to the audience and deliver whatever point they are trying to get across. They also cannot control their slides, so they have to have their timing perfect. Talk about…

  • Arzeda and Mitsubishi Rayon Ltd announce new industrial collaboration

    Arzeda and Mitsubishi Rayon Ltd announce new industrial collaboration

    On February 9th, Arzeda, and Mitsubishi Rayon Ltd announced that they would “collaborate on development of new processes for industrial chemicals production.” Read more about it on Mitsubishi Rayon’s website, here, or on Arzeda’s site, here. Arzeda is an IPD spin-out, of which David Baker is a co-founder and Scientific…